Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16■□□□□ 0.15
RARAP10276 AC036164.1-201ENST00000570544 333 ntBASIC16■□□□□ 0.15
RARAP10276 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16■□□□□ 0.15
RARAP10276 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16■□□□□ 0.15
RARAP10276 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16■□□□□ 0.15
RARAP10276 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16■□□□□ 0.15
RARAP10276 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
RARAP10276 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16■□□□□ 0.15
RARAP10276 DRD5P1-201ENST00000456605 1438 ntBASIC16■□□□□ 0.15
RARAP10276 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RARAP10276 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RARAP10276 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.99■□□□□ 0.15
RARAP10276 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.99■□□□□ 0.15
RARAP10276 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.99■□□□□ 0.15
RARAP10276 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.99■□□□□ 0.15
RARAP10276 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RARAP10276 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 PCDHA3-202ENST00000532566 4594 ntBASIC15.99■□□□□ 0.15
RARAP10276 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RARAP10276 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 AC113367.3-201ENST00000508316 1912 ntBASIC15.98■□□□□ 0.15
RARAP10276 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 MIR770-201ENST00000390219 98 ntBASIC15.98■□□□□ 0.15
RARAP10276 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RARAP10276 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.98■□□□□ 0.15
RARAP10276 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.98■□□□□ 0.15
RARAP10276 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RARAP10276 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.98■□□□□ 0.15
RARAP10276 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.98■□□□□ 0.15
RARAP10276 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 AL662799.1-202ENST00000614205 422 ntBASIC15.98■□□□□ 0.15
RARAP10276 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.98■□□□□ 0.15
RARAP10276 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms