Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 AGAP7P-201ENST00000582299 2062 ntBASIC13.57□□□□□ -0.24
APOC1P02654 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 AGAP14-201ENST00000624701 2060 ntBASIC13.57□□□□□ -0.24
APOC1P02654 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 ZBED1P1-201ENST00000502364 1930 ntBASIC13.57□□□□□ -0.24
APOC1P02654 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 PEG13-201ENST00000631594 5667 ntBASIC13.57□□□□□ -0.24
APOC1P02654 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 MIR1233-2-201ENST00000408138 82 ntBASIC13.57□□□□□ -0.24
APOC1P02654 MIR1233-1-201ENST00000408722 82 ntBASIC13.57□□□□□ -0.24
APOC1P02654 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
APOC1P02654 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.57□□□□□ -0.24
APOC1P02654 KLF2P3-201ENST00000451977 1087 ntBASIC13.57□□□□□ -0.24
APOC1P02654 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 TEX28P1-201ENST00000613479 1221 ntBASIC13.57□□□□□ -0.24
APOC1P02654 TEX28P2-201ENST00000617764 1221 ntBASIC13.57□□□□□ -0.24
APOC1P02654 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
APOC1P02654 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
APOC1P02654 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
APOC1P02654 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APOC1P02654 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
APOC1P02654 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.57□□□□□ -0.24
APOC1P02654 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.56□□□□□ -0.24
APOC1P02654 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APOC1P02654 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.56□□□□□ -0.24
APOC1P02654 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 AC107890.1-201ENST00000422478 521 ntBASIC13.56□□□□□ -0.24
APOC1P02654 FAM8A3P-201ENST00000427218 844 ntBASIC13.56□□□□□ -0.24
APOC1P02654 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.56□□□□□ -0.24
APOC1P02654 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.56□□□□□ -0.24
APOC1P02654 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms