Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.51□□□□□ -0.57
LTAP01374 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LTAP01374 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LTAP01374 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.51□□□□□ -0.57
LTAP01374 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 AL354702.1-201ENST00000442006 1960 ntBASIC11.5□□□□□ -0.57
LTAP01374 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 AC087386.2-201ENST00000623212 4637 ntBASIC11.5□□□□□ -0.57
LTAP01374 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LTAP01374 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.5□□□□□ -0.57
LTAP01374 SPCS2P4-201ENST00000436160 681 ntBASIC11.5□□□□□ -0.57
LTAP01374 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 IGHV3-62-201ENST00000520057 340 ntBASIC11.5□□□□□ -0.57
LTAP01374 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LTAP01374 LINC01225-203ENST00000563550 1244 ntBASIC11.5□□□□□ -0.57
LTAP01374 RARRES2P9-201ENST00000565168 469 ntBASIC11.5□□□□□ -0.57
LTAP01374 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 AL513190.1-201ENST00000621254 727 ntBASIC11.5□□□□□ -0.57
LTAP01374 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 AC018665.1-201ENST00000622927 1362 ntBASIC11.5□□□□□ -0.57
LTAP01374 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms