Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 TNRC18P2-201ENST00000417666 2714 ntBASIC15.4■□□□□ 0.06
PRAMEF11O60813 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF11O60813 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF11O60813 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 PDIA3P1-201ENST00000471856 1510 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 BOLA2P3-201ENST00000404566 256 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 POM121L8P-201ENST00000417732 1281 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 POM121L9P-203ENST00000441984 1285 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 FO681548.1-201ENST00000455617 1132 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 KRT90P-201ENST00000549264 1064 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.39■□□□□ 0.05
PRAMEF11O60813 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF11O60813 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF11O60813 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC011270.2-201ENST00000624293 2550 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 ARSEP1-201ENST00000420443 635 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 CNN2P8-201ENST00000421872 913 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 FAM197Y7-201ENST00000432892 766 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC234783.1-201ENST00000441761 496 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 GPR53P-205ENST00000457298 1084 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 RNA5SP486-201ENST00000515961 83 ntBASIC15.38■□□□□ 0.05
PRAMEF11O60813 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRAMEF11O60813 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF11O60813 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms