Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
AP3B1O00203 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.43■□□□□ 0.06
AP3B1O00203 DOC2GP-202ENST00000514950 1163 ntBASIC15.43■□□□□ 0.06
AP3B1O00203 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.43■□□□□ 0.06
AP3B1O00203 AL049840.4-201ENST00000602422 811 ntBASIC15.43■□□□□ 0.06
AP3B1O00203 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.43■□□□□ 0.06
AP3B1O00203 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.43■□□□□ 0.06
AP3B1O00203 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.43■□□□□ 0.06
AP3B1O00203 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
AP3B1O00203 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.43■□□□□ 0.06
AP3B1O00203 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP3B1O00203 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.43■□□□□ 0.06
AP3B1O00203 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
AP3B1O00203 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.42■□□□□ 0.06
AP3B1O00203 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.42■□□□□ 0.06
AP3B1O00203 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.42■□□□□ 0.06
AP3B1O00203 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
AP3B1O00203 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.42■□□□□ 0.06
AP3B1O00203 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.42■□□□□ 0.06
AP3B1O00203 RNA5SP421-201ENST00000516864 134 ntBASIC15.42■□□□□ 0.06
AP3B1O00203 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.42■□□□□ 0.06
AP3B1O00203 AC107373.2-201ENST00000607735 490 ntBASIC15.42■□□□□ 0.06
AP3B1O00203 AC099568.2-201ENST00000609194 695 ntBASIC15.42■□□□□ 0.06
AP3B1O00203 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 AL603764.1-201ENST00000636452 321 ntBASIC15.42■□□□□ 0.06
AP3B1O00203 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
AP3B1O00203 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP3B1O00203 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
AP3B1O00203 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.41■□□□□ 0.06
AP3B1O00203 AC093004.1-201ENST00000508850 424 ntBASIC15.41■□□□□ 0.06
AP3B1O00203 AC104596.2-201ENST00000512793 793 ntBASIC15.41■□□□□ 0.06
AP3B1O00203 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP3B1O00203 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.41■□□□□ 0.06
AP3B1O00203 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.41■□□□□ 0.06
AP3B1O00203 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.41■□□□□ 0.06
AP3B1O00203 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.41■□□□□ 0.06
AP3B1O00203 AC093512.1-201ENST00000617969 520 ntBASIC15.41■□□□□ 0.06
AP3B1O00203 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.41■□□□□ 0.06
AP3B1O00203 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP3B1O00203 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms