Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC002056.1-201ENST00000395613 760 ntBASIC10.72□□□□□ -0.69
LINC01546A6NGU7 SPDYE17-201ENST00000412399 783 ntBASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC136604.1-202ENST00000425471 771 ntBASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 MKRN5P-201ENST00000445263 1467 ntBASIC10.72□□□□□ -0.69
LINC01546A6NGU7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 AC135782.3-201ENST00000562782 2105 ntBASIC10.72□□□□□ -0.69
LINC01546A6NGU7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 RPS2P28-201ENST00000314255 741 ntBASIC10.71□□□□□ -0.69
LINC01546A6NGU7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 POM121L14P-201ENST00000406100 1558 ntBASIC10.71□□□□□ -0.69
LINC01546A6NGU7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 HNRNPDP1-201ENST00000439535 754 ntBASIC10.71□□□□□ -0.69
LINC01546A6NGU7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 AC018712.1-201ENST00000455767 687 ntBASIC10.71□□□□□ -0.69
LINC01546A6NGU7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms