Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 NUS1P3-201ENST00000423502 862 ntBASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 AC022137.2-201ENST00000503482 481 ntBASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 AP001889.1-201ENST00000525414 633 ntBASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP3Q9BWW4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SSBP3Q9BWW4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP3Q9BWW4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP3Q9BWW4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP3Q9BWW4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP3Q9BWW4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 MIR658-201ENST00000385210 100 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 CROCCP4-201ENST00000457096 498 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AL645728.2-202ENST00000641679 227 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AC105250.1-201ENST00000509378 2057 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 SBF1P1-201ENST00000444527 5631 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AC013268.4-201ENST00000637413 2228 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 AC099063.4-201ENST00000641099 1602 ntBASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP3Q9BWW4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms