Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 AC007431.3-201ENST00000623221 587 ntBASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF4Q9BUZ4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 KRT8P44-201ENST00000441609 1350 ntBASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 FO393414.2-201ENST00000405153 598 ntBASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 RN7SL752P-201ENST00000463779 287 ntBASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 WASH4P-201ENST00000564273 1246 ntBASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF4Q9BUZ4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms