Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 GAPDHP21-201ENST00000450301 1010 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 RN7SL692P-201ENST00000464677 288 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 AP005018.1-201ENST00000525475 301 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 AC005252.3-201ENST00000623855 2258 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 AP001282.1-201ENST00000531301 1499 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF2Q99805 KRT8P37-201ENST00000451609 1420 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 AC005912.2-201ENST00000619492 2400 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 GNAQP1-201ENST00000444815 1067 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 EEF1DP4-201ENST00000446006 880 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 AC055876.2-201ENST00000531834 546 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 TPRX2P-201ENST00000535362 881 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 AL596325.1-201ENST00000563991 1082 ntBASIC14.24□□□□□ -0.13
TM9SF2Q99805 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF2Q99805 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF2Q99805 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF2Q99805 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TM9SF2Q99805 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.23□□□□□ -0.13
TM9SF2Q99805 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF2Q99805 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF2Q99805 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TM9SF2Q99805 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.23□□□□□ -0.13
TM9SF2Q99805 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TM9SF2Q99805 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms