Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 AC003102.2-201ENST00000589195 1469 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDCA3Q99618 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.61■□□□□ 0.09
CDCA3Q99618 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.61■□□□□ 0.09
CDCA3Q99618 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.61■□□□□ 0.09
CDCA3Q99618 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.61■□□□□ 0.09
CDCA3Q99618 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.61■□□□□ 0.09
CDCA3Q99618 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.61■□□□□ 0.09
CDCA3Q99618 MEG3_2.1-201ENST00000611456 105 ntBASIC15.61■□□□□ 0.09
CDCA3Q99618 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 KRT18P9-201ENST00000604826 1300 ntBASIC15.61■□□□□ 0.09
CDCA3Q99618 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.61■□□□□ 0.09
CDCA3Q99618 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDCA3Q99618 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.61■□□□□ 0.09
CDCA3Q99618 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDCA3Q99618 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.6■□□□□ 0.09
CDCA3Q99618 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDCA3Q99618 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 AL512430.1-201ENST00000392575 860 ntBASIC15.6■□□□□ 0.09
CDCA3Q99618 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AL645933.1-201ENST00000440087 609 ntBASIC15.6■□□□□ 0.09
CDCA3Q99618 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.6■□□□□ 0.09
CDCA3Q99618 IGHV3-37-201ENST00000518544 340 ntBASIC15.6■□□□□ 0.09
CDCA3Q99618 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AC007881.3-201ENST00000608897 607 ntBASIC15.6■□□□□ 0.09
CDCA3Q99618 AC087392.5-201ENST00000612517 489 ntBASIC15.6■□□□□ 0.09
CDCA3Q99618 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDCA3Q99618 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDCA3Q99618 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDCA3Q99618 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.6■□□□□ 0.09
CDCA3Q99618 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 ZBED1P1-201ENST00000502364 1930 ntBASIC15.59■□□□□ 0.09
CDCA3Q99618 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CDCA3Q99618 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDCA3Q99618 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.59■□□□□ 0.09
CDCA3Q99618 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms