Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 POP5-201ENST00000341039 913 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 FAM21EP-201ENST00000417804 985 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 KRT18P62-201ENST00000446618 1287 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AL391822.1-201ENST00000452580 562 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AP005121.2-201ENST00000583306 1101 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 IGLCOR22-1-201ENST00000523725 316 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC091691.1-201ENST00000583587 1018 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AL136084.3-201ENST00000605631 439 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC113385.2-201ENST00000614465 762 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 HNRNPA1P21-201ENST00000424115 961 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 HTATSF1P1-201ENST00000432008 984 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC132216.1-201ENST00000610375 1158 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 AC138907.9-201ENST00000623747 986 ntBASIC4.44□□□□□ -1.7
HMCN1Q96RW7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMCN1Q96RW7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC097474.1-201ENST00000506481 1371 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC013726.1-201ENST00000563747 2285 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RNU1-80P-201ENST00000459500 161 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms