Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 Z69890.1-201ENST00000382990 339 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PUDPP3-201ENST00000445368 636 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PHBP15-201ENST00000574228 665 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AP003398.1-201ENST00000531124 318 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 HCG18-241ENST00000602290 821 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 MIR5001-201ENST00000580185 100 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AL109837.1-201ENST00000603272 613 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 AL450472.2-201ENST00000603663 1156 ntBASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD1Q96PZ7 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AP000593.2-201ENST00000542775 1433 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 PRORSD1P-202ENST00000563365 2154 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AC055811.4-201ENST00000624039 1754 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AL137077.2-201ENST00000635124 1608 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 FAM58BP-201ENST00000439056 645 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 TREHP1-201ENST00000531328 465 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AL353622.2-201ENST00000605846 425 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 MIR6769A-201ENST00000617340 73 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 BCL2L12P1-201ENST00000508390 733 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms