Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 FAM207CP-201ENST00000443486 507 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 AC104794.3-201ENST00000566840 1248 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 SRD5A3P1-201ENST00000603021 949 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.49□□□□□ -0.09
COL21A1Q96P44 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.49□□□□□ -0.09
COL21A1Q96P44 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL21A1Q96P44 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 KRT18P64-201ENST00000434946 1219 ntBASIC14.48□□□□□ -0.09
COL21A1Q96P44 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 SPDYE18-201ENST00000510091 1050 ntBASIC14.48□□□□□ -0.09
COL21A1Q96P44 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 AJ011931.1-201ENST00000618749 2492 ntBASIC14.48□□□□□ -0.09
COL21A1Q96P44 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL21A1Q96P44 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.48□□□□□ -0.09
COL21A1Q96P44 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms