Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DHX58Q96C10 AL157414.3-201ENST00000624276 1954 ntBASIC17.26■□□□□ 0.35
DHX58Q96C10 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.25■□□□□ 0.35
DHX58Q96C10 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.25■□□□□ 0.35
DHX58Q96C10 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 BASP1P1-201ENST00000430708 665 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.25■□□□□ 0.35
DHX58Q96C10 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 AC023310.3-201ENST00000557027 670 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 AC100756.1-201ENST00000562736 682 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 AC138749.3-201ENST00000567691 622 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.25■□□□□ 0.35
DHX58Q96C10 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 AC116165.1-201ENST00000611806 668 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 AC018529.2-202ENST00000611482 3087 ntBASIC17.25■□□□□ 0.35
DHX58Q96C10 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.25■□□□□ 0.35
DHX58Q96C10 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
DHX58Q96C10 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DHX58Q96C10 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
DHX58Q96C10 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
DHX58Q96C10 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.24■□□□□ 0.35
DHX58Q96C10 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
DHX58Q96C10 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.24■□□□□ 0.35
DHX58Q96C10 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DHX58Q96C10 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DHX58Q96C10 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.24■□□□□ 0.35
DHX58Q96C10 FAM86LP-201ENST00000478302 853 ntBASIC17.24■□□□□ 0.35
DHX58Q96C10 GAPDHP40-201ENST00000505218 1006 ntBASIC17.24■□□□□ 0.35
DHX58Q96C10 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.24■□□□□ 0.35
DHX58Q96C10 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
DHX58Q96C10 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.24■□□□□ 0.35
DHX58Q96C10 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.24■□□□□ 0.35
DHX58Q96C10 GPALPP1-207ENST00000611650 899 ntBASIC17.24■□□□□ 0.35
DHX58Q96C10 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.24■□□□□ 0.35
DHX58Q96C10 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.24■□□□□ 0.35
DHX58Q96C10 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.24■□□□□ 0.35
DHX58Q96C10 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 MTHFR-210ENST00000641407 2387 ntBASIC17.24■□□□□ 0.35
DHX58Q96C10 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
DHX58Q96C10 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DHX58Q96C10 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.23■□□□□ 0.35
DHX58Q96C10 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.23■□□□□ 0.35
DHX58Q96C10 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
DHX58Q96C10 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
DHX58Q96C10 AC140479.7-201ENST00000636301 2332 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms