Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC068587.3-201ENST00000526613 355 ntBASIC13.74□□□□□ -0.21
CPNE4Q96A23 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC239800.4-201ENST00000603712 296 ntBASIC13.74□□□□□ -0.21
CPNE4Q96A23 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 PCDHA3-202ENST00000532566 4594 ntBASIC13.73□□□□□ -0.21
CPNE4Q96A23 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 AC022532.1-201ENST00000624563 1728 ntBASIC13.73□□□□□ -0.21
CPNE4Q96A23 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 KRT8P44-201ENST00000441609 1350 ntBASIC13.73□□□□□ -0.21
CPNE4Q96A23 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 BAATP1-201ENST00000412284 1225 ntBASIC13.73□□□□□ -0.21
CPNE4Q96A23 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 AC012441.1-201ENST00000446669 685 ntBASIC13.73□□□□□ -0.21
CPNE4Q96A23 AL355864.2-201ENST00000447420 863 ntBASIC13.73□□□□□ -0.21
CPNE4Q96A23 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPNE4Q96A23 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPNE4Q96A23 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AL158070.2-201ENST00000623713 1621 ntBASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC144831.1-201ENST00000573312 2656 ntBASIC13.72□□□□□ -0.21
CPNE4Q96A23 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPNE4Q96A23 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 KRT43P-201ENST00000434019 910 ntBASIC13.72□□□□□ -0.21
CPNE4Q96A23 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC093433.1-201ENST00000458048 571 ntBASIC13.72□□□□□ -0.21
CPNE4Q96A23 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC008735.3-201ENST00000596646 500 ntBASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC233724.13-201ENST00000598383 410 ntBASIC13.72□□□□□ -0.21
CPNE4Q96A23 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.72□□□□□ -0.21
CPNE4Q96A23 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms