Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 FAM197Y7-201ENST00000432892 766 ntBASIC25.92■■□□□ 1.74
TRIM41Q8WV44 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 KRT18P25-201ENST00000508931 1278 ntBASIC25.92■■□□□ 1.74
TRIM41Q8WV44 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 AC027139.1-201ENST00000565286 951 ntBASIC25.92■■□□□ 1.74
TRIM41Q8WV44 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 AC103691.2-201ENST00000618824 433 ntBASIC25.92■■□□□ 1.74
TRIM41Q8WV44 FO393412.1-201ENST00000619841 382 ntBASIC25.92■■□□□ 1.74
TRIM41Q8WV44 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
TRIM41Q8WV44 AC087481.3-201ENST00000602886 1894 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 GSN-206ENST00000394353 2311 ntTSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 ACTG1P2-201ENST00000415776 1125 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 ACTG1P11-201ENST00000425411 1125 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AC078991.1-201ENST00000437297 610 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AC114812.1-204ENST00000449669 728 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AC025279.2-201ENST00000569730 653 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AL353622.2-201ENST00000605846 425 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 AC138951.2-201ENST00000623455 1161 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 HYMAI-201ENST00000635591 3347 ntBASIC25.91■■□□□ 1.74
TRIM41Q8WV44 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC25.91■■□□□ 1.74
TRIM41Q8WV44 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 API5-202ENST00000420461 2009 ntTSL 2 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 AC026316.1-201ENST00000398900 414 ntBASIC25.9■■□□□ 1.74
TRIM41Q8WV44 ACTBP8-201ENST00000403258 1108 ntBASIC25.9■■□□□ 1.74
TRIM41Q8WV44 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 SSR4P1-203ENST00000599569 2260 ntBASIC25.9■■□□□ 1.74
TRIM41Q8WV44 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
TRIM41Q8WV44 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 UROS-201ENST00000368774 744 ntTSL 2 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 AL139094.1-201ENST00000405549 1188 ntBASIC25.89■■□□□ 1.74
TRIM41Q8WV44 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC25.89■■□□□ 1.74
TRIM41Q8WV44 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC25.89■■□□□ 1.74
TRIM41Q8WV44 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TRIM41Q8WV44 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TRIM41Q8WV44 AC112693.3-201ENST00000624819 1983 ntBASIC25.89■■□□□ 1.73
TRIM41Q8WV44 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TRIM41Q8WV44 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC25.89■■□□□ 1.73
TRIM41Q8WV44 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC25.89■■□□□ 1.73
TRIM41Q8WV44 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIM41Q8WV44 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms