Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC006116.2-201ENST00000589958 988 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 OR10N1P-201ENST00000392758 869 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 KRT18P46-201ENST00000435568 1279 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 DUT-207ENST00000559416 635 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 NAV1-210ENST00000593583 726 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC092570.1-201ENST00000414446 469 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC006529.1-201ENST00000459978 637 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 RN7SL665P-201ENST00000578793 300 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC055811.3-201ENST00000584952 686 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AHCYP4-201ENST00000419201 1315 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 CICP6-201ENST00000457191 2729 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 DPY19L2P5-201ENST00000456300 331 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AC092896.1-201ENST00000465850 380 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 AL590235.1-201ENST00000564650 861 ntBASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ALMS1Q8TCU4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 WASH7P-201ENST00000488147 1351 ntBASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 AL162727.3-201ENST00000635661 2787 ntBASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC9.91□□□□□ -0.82
ALMS1Q8TCU4 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms