Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TSPY16P-201ENST00000449843 468 ntBASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AL360270.3-201ENST00000609118 1348 ntBASIC14.3□□□□□ -0.12
NUP43Q8NFH3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AL353779.1-201ENST00000434793 351 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AC093813.1-201ENST00000605066 256 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AC099568.2-201ENST00000609194 695 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 MIR8072-201ENST00000614241 80 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AC093525.8-201ENST00000624099 1342 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AL158070.2-201ENST00000623713 1621 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 AL157414.3-201ENST00000624276 1954 ntBASIC14.29□□□□□ -0.12
NUP43Q8NFH3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NUP43Q8NFH3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NUP43Q8NFH3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms