Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC055811.4-201ENST00000624039 1754 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AL354989.2-201ENST00000435838 1540 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AHCYP2-201ENST00000430630 1300 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 GHSR-202ENST00000427970 912 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 HLA-K-203ENST00000430151 1046 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC092658.1-201ENST00000505836 891 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 RNA5SP412-201ENST00000516234 123 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 RN7SL48P-201ENST00000579283 293 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC009542.2-202ENST00000619004 1067 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ENPP7P14-201ENST00000621765 1040 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC008687.7-202ENST00000637404 953 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 AC112693.3-201ENST00000624819 1983 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 REXO1L4P-201ENST00000605109 1937 ntBASIC16.06■□□□□ 0.16
SCN4BQ8IWT1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 TMBIM7P-203ENST00000641617 1718 ntBASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AL360270.3-201ENST00000609118 1348 ntBASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 BRWD1P1-201ENST00000401091 371 ntBASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 RN7SL219P-201ENST00000582872 296 ntBASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms