Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 KRT8P14-201ENST00000414254 1442 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 RNU1-114P-201ENST00000365297 166 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 ACTG1P3-201ENST00000431775 1114 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 TTTY23B-201ENST00000442790 549 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AC093433.1-201ENST00000458048 571 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AP005019.2-201ENST00000615104 511 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AL157414.3-201ENST00000624276 1954 ntBASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FAM90A1Q86YD7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 MSTO2P-201ENST00000314835 1709 ntBASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 HLA-K-203ENST00000430151 1046 ntBASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 KRT17P7-201ENST00000451704 1104 ntBASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 TDH-203ENST00000531764 1110 ntBASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 CR383656.12-201ENST00000549567 513 ntBASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM90A1Q86YD7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms