Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 AC063926.2-201ENST00000623766 1308 ntBASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 AC093525.8-201ENST00000624099 1342 ntBASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NUP54Q7Z3B4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC007787.1-201ENST00000588095 1583 ntBASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 WASH3P-207ENST00000560956 1394 ntBASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC099063.4-201ENST00000641099 1602 ntBASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 GAPDHP21-201ENST00000450301 1010 ntBASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 AC148477.4-201ENST00000613430 1793 ntBASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NUP54Q7Z3B4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP54Q7Z3B4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP54Q7Z3B4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NUP54Q7Z3B4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NUP54Q7Z3B4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NUP54Q7Z3B4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NUP54Q7Z3B4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms