Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13CQ709C8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13CQ709C8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AC006058.4-201ENST00000624016 1670 ntBASIC12.35□□□□□ -0.43
VPS13CQ709C8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 FAM90A2P-201ENST00000511144 1395 ntBASIC12.35□□□□□ -0.43
VPS13CQ709C8 FAM90A25P-201ENST00000528404 1395 ntBASIC12.35□□□□□ -0.43
VPS13CQ709C8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AC026320.2-201ENST00000434379 478 ntBASIC12.35□□□□□ -0.43
VPS13CQ709C8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.35□□□□□ -0.43
VPS13CQ709C8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AC004066.1-201ENST00000502488 802 ntBASIC12.35□□□□□ -0.43
VPS13CQ709C8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
VPS13CQ709C8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13CQ709C8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 TSPY25P-201ENST00000429463 745 ntBASIC12.34□□□□□ -0.43
VPS13CQ709C8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 BANF1P3-201ENST00000412556 261 ntBASIC12.34□□□□□ -0.43
VPS13CQ709C8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 PUDPP3-201ENST00000445368 636 ntBASIC12.34□□□□□ -0.43
VPS13CQ709C8 AP000358.1-201ENST00000456260 156 ntBASIC12.34□□□□□ -0.43
VPS13CQ709C8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 LINC00431-202ENST00000636375 159 ntBASIC12.34□□□□□ -0.43
VPS13CQ709C8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 AC002472.3-201ENST00000640124 621 ntBASIC12.34□□□□□ -0.43
VPS13CQ709C8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13CQ709C8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13CQ709C8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms