Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 AC232323.1-201ENST00000540724 2099 ntBASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 OR2I1P-210ENST00000642037 4691 ntBASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 AL138799.1-201ENST00000448213 1675 ntBASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF549Q6P9A3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 AC007292.2-201ENST00000593524 1812 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 MIR661-201ENST00000384842 89 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 HLA-K-203ENST00000430151 1046 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 SERBP1P5-201ENST00000510079 1181 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 AC018529.2-202ENST00000611482 3087 ntBASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF549Q6P9A3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 AL158070.2-201ENST00000623713 1621 ntBASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 MIR770-201ENST00000390219 98 ntBASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms