Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 MIR1908-201ENST00000410394 80 ntBASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 ACTBP11-201ENST00000436287 1126 ntBASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AC006453.4-201ENST00000636949 1252 ntBASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 CICP13-201ENST00000422015 2789 ntBASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AC009090.5-201ENST00000624886 2285 ntBASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.12□□□□□ -0.15
H3F3CQ6NXT2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3F3CQ6NXT2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms