Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AL603764.1-201ENST00000636452 321 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 TPT1P11-201ENST00000458482 498 ntBASIC15.8■□□□□ 0.12
LRRC38Q5VT99 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC38Q5VT99 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AC015802.1-201ENST00000588104 1449 ntBASIC15.79■□□□□ 0.12
LRRC38Q5VT99 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 GNAQP1-201ENST00000444815 1067 ntBASIC15.79■□□□□ 0.12
LRRC38Q5VT99 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AC104596.2-201ENST00000512793 793 ntBASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 AC093726.1-201ENST00000608064 963 ntBASIC15.79■□□□□ 0.12
LRRC38Q5VT99 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 GRK6P1-201ENST00000400595 1711 ntBASIC15.79■□□□□ 0.12
LRRC38Q5VT99 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC38Q5VT99 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC38Q5VT99 KRT8P22-201ENST00000562317 1415 ntBASIC15.78■□□□□ 0.12
LRRC38Q5VT99 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC38Q5VT99 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC38Q5VT99 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms