Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSBP1Q04837 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 TARDBPP1-201ENST00000442013 1203 ntBASIC12.92□□□□□ -0.34
SSBP1Q04837 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 RN7SL589P-201ENST00000481268 310 ntBASIC12.92□□□□□ -0.34
SSBP1Q04837 AC079776.4-201ENST00000511039 504 ntBASIC12.92□□□□□ -0.34
SSBP1Q04837 FAM86C2P-203ENST00000528684 1004 ntBASIC12.92□□□□□ -0.34
SSBP1Q04837 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.92□□□□□ -0.34
SSBP1Q04837 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SSBP1Q04837 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
SSBP1Q04837 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 SPDYE17-201ENST00000412399 783 ntBASIC12.91□□□□□ -0.34
SSBP1Q04837 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.91□□□□□ -0.34
SSBP1Q04837 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SSBP1Q04837 AL135744.1-201ENST00000565098 629 ntBASIC12.91□□□□□ -0.34
SSBP1Q04837 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 AP000842.3-202ENST00000569238 1080 ntBASIC12.91□□□□□ -0.34
SSBP1Q04837 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SSBP1Q04837 AL121912.1-201ENST00000603683 238 ntBASIC12.91□□□□□ -0.34
SSBP1Q04837 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 AC130686.1-201ENST00000622936 2466 ntBASIC12.91□□□□□ -0.34
SSBP1Q04837 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP1Q04837 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP1Q04837 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 AC105206.1-202ENST00000314927 2368 ntBASIC12.91□□□□□ -0.34
SSBP1Q04837 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SSBP1Q04837 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP1Q04837 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SSBP1Q04837 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms