Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S1P61966 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S1P61966 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S1P61966 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S1P61966 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S1P61966 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S1P61966 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S1P61966 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S1P61966 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
AP1S1P61966 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP1S1P61966 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S1P61966 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S1P61966 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S1P61966 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S1P61966 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 AC245100.3-201ENST00000441281 285 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S1P61966 KRT90P-201ENST00000549264 1064 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S1P61966 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 AL512343.1-201ENST00000605837 169 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 ENPP7P14-201ENST00000621765 1040 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S1P61966 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 ACE3P-201ENST00000423435 1973 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
AP1S1P61966 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S1P61966 TCAF2P1-201ENST00000291129 2421 ntBASIC15.31■□□□□ 0.04
AP1S1P61966 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S1P61966 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S1P61966 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S1P61966 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
AP1S1P61966 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S1P61966 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S1P61966 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
AP1S1P61966 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
AP1S1P61966 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S1P61966 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
AP1S1P61966 ARSEP1-201ENST00000420443 635 ntBASIC15.3■□□□□ 0.04
AP1S1P61966 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S1P61966 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S1P61966 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 CROCCP4-201ENST00000457096 498 ntBASIC15.3■□□□□ 0.04
AP1S1P61966 ACA64.2-201ENST00000459014 129 ntBASIC15.3■□□□□ 0.04
AP1S1P61966 PDIA3P1-201ENST00000471856 1510 ntBASIC15.3■□□□□ 0.04
AP1S1P61966 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S1P61966 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 AC026434.2-201ENST00000506094 1078 ntBASIC15.3■□□□□ 0.04
AP1S1P61966 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms