Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.46□□□□□ -0.25
SEC61A1P61619 AC140479.7-201ENST00000636301 2332 ntBASIC13.46□□□□□ -0.25
SEC61A1P61619 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.46□□□□□ -0.25
SEC61A1P61619 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SEC61A1P61619 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
SEC61A1P61619 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SEC61A1P61619 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.46□□□□□ -0.25
SEC61A1P61619 MRPS18AP1-201ENST00000414458 589 ntBASIC13.46□□□□□ -0.25
SEC61A1P61619 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.46□□□□□ -0.25
SEC61A1P61619 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SEC61A1P61619 TSPY16P-201ENST00000449843 468 ntBASIC13.46□□□□□ -0.25
SEC61A1P61619 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.46□□□□□ -0.25
SEC61A1P61619 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.46□□□□□ -0.25
SEC61A1P61619 HLA-V-204ENST00000476601 1289 ntBASIC13.46□□□□□ -0.25
SEC61A1P61619 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.46□□□□□ -0.25
SEC61A1P61619 AL079307.3-201ENST00000556114 283 ntBASIC13.46□□□□□ -0.25
SEC61A1P61619 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.46□□□□□ -0.25
SEC61A1P61619 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SEC61A1P61619 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SEC61A1P61619 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SEC61A1P61619 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.26
SEC61A1P61619 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
SEC61A1P61619 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SEC61A1P61619 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 REXO1L1P-202ENST00000608646 1974 ntBASIC13.45□□□□□ -0.26
SEC61A1P61619 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.45□□□□□ -0.26
SEC61A1P61619 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AP001282.1-201ENST00000531301 1499 ntBASIC13.45□□□□□ -0.26
SEC61A1P61619 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.45□□□□□ -0.26
SEC61A1P61619 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AL080243.2-201ENST00000418783 582 ntBASIC13.45□□□□□ -0.26
SEC61A1P61619 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.45□□□□□ -0.26
SEC61A1P61619 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.45□□□□□ -0.26
SEC61A1P61619 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.45□□□□□ -0.26
SEC61A1P61619 RN7SL204P-201ENST00000582831 262 ntBASIC13.45□□□□□ -0.26
SEC61A1P61619 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 LINC01230-201ENST00000625222 3017 ntBASIC13.45□□□□□ -0.26
SEC61A1P61619 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms