Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SPCS3P61009 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.51□□□□□ -0.41
SPCS3P61009 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 GHSR-202ENST00000427970 912 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 AL353705.2-201ENST00000428243 662 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.51□□□□□ -0.41
SPCS3P61009 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
SPCS3P61009 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.51□□□□□ -0.41
SPCS3P61009 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.51□□□□□ -0.41
SPCS3P61009 KRT126P-201ENST00000549467 1181 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.51□□□□□ -0.41
SPCS3P61009 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.51□□□□□ -0.41
SPCS3P61009 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.51□□□□□ -0.41
SPCS3P61009 RARRES2P9-201ENST00000565168 469 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 AC106730.1-201ENST00000566722 1090 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
SPCS3P61009 AC084121.4-201ENST00000641598 221 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 AF228730.8-201ENST00000642140 221 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 IL9RP2-201ENST00000423948 1312 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 ACTG1P14-201ENST00000446382 1122 ntBASIC12.5□□□□□ -0.41
SPCS3P61009 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.5□□□□□ -0.41
SPCS3P61009 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.5□□□□□ -0.41
SPCS3P61009 KRT8P48-201ENST00000515599 1220 ntBASIC12.5□□□□□ -0.41
SPCS3P61009 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 SLC25A39P2-201ENST00000537614 270 ntBASIC12.5□□□□□ -0.41
SPCS3P61009 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.5□□□□□ -0.41
SPCS3P61009 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 AC140113.2-201ENST00000604370 208 ntBASIC12.5□□□□□ -0.41
SPCS3P61009 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 AC055717.3-201ENST00000622967 595 ntBASIC12.5□□□□□ -0.41
SPCS3P61009 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.5□□□□□ -0.41
SPCS3P61009 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 1001.2 ms