Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL691432.1-201ENST00000596308 1422 ntBASIC14.24□□□□□ -0.13
PER3P56645 AL596087.1-201ENST00000400979 1969 ntBASIC14.23□□□□□ -0.13
PER3P56645 ME2P1-201ENST00000426028 1970 ntBASIC14.23□□□□□ -0.13
PER3P56645 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.23□□□□□ -0.13
PER3P56645 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PER3P56645 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PER3P56645 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 AC005229.1-201ENST00000392885 409 ntBASIC14.23□□□□□ -0.13
PER3P56645 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.23□□□□□ -0.13
PER3P56645 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 AC099548.2-209ENST00000480264 625 ntBASIC14.23□□□□□ -0.13
PER3P56645 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.23□□□□□ -0.13
PER3P56645 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.23□□□□□ -0.13
PER3P56645 ENPP7P5-201ENST00000541031 1031 ntBASIC14.23□□□□□ -0.13
PER3P56645 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PER3P56645 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PER3P56645 MIR5189-201ENST00000577370 114 ntBASIC14.23□□□□□ -0.13
PER3P56645 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.23□□□□□ -0.13
PER3P56645 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.23□□□□□ -0.13
PER3P56645 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
PER3P56645 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PER3P56645 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.23□□□□□ -0.13
PER3P56645 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PER3P56645 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PER3P56645 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PER3P56645 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PER3P56645 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.22□□□□□ -0.13
PER3P56645 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.22□□□□□ -0.13
PER3P56645 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 AC099336.1-201ENST00000417053 1171 ntBASIC14.22□□□□□ -0.13
PER3P56645 RPL7P3-201ENST00000441388 714 ntBASIC14.22□□□□□ -0.13
PER3P56645 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.22□□□□□ -0.13
PER3P56645 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.22□□□□□ -0.13
PER3P56645 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.22□□□□□ -0.13
PER3P56645 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PER3P56645 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 AC243960.2-201ENST00000600996 747 ntBASIC14.22□□□□□ -0.13
PER3P56645 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms