Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.94■□□□□ 0.3
TM4SF4P48230 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.94■□□□□ 0.3
TM4SF4P48230 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.93■□□□□ 0.3
TM4SF4P48230 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 ERP29P1-201ENST00000442902 706 ntBASIC16.93■□□□□ 0.3
TM4SF4P48230 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.93■□□□□ 0.3
TM4SF4P48230 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 RN7SL357P-201ENST00000581065 298 ntBASIC16.93■□□□□ 0.3
TM4SF4P48230 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.93■□□□□ 0.3
TM4SF4P48230 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
TM4SF4P48230 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM4SF4P48230 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TM4SF4P48230 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.92■□□□□ 0.3
TM4SF4P48230 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 AC092364.2-201ENST00000596710 2692 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 AC018638.5-201ENST00000450885 754 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 RPL18AP8-201ENST00000486071 528 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 PGAM1P12-201ENST00000505622 748 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.92■□□□□ 0.3
TM4SF4P48230 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.92■□□□□ 0.3
TM4SF4P48230 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.92■□□□□ 0.3
TM4SF4P48230 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 AL139339.2-201ENST00000608063 657 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.92■□□□□ 0.3
TM4SF4P48230 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.92■□□□□ 0.3
TM4SF4P48230 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TM4SF4P48230 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TM4SF4P48230 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.92■□□□□ 0.3
TM4SF4P48230 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 AC012313.1-201ENST00000593393 3059 ntBASIC16.92■□□□□ 0.3
TM4SF4P48230 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TM4SF4P48230 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.92■□□□□ 0.3
TM4SF4P48230 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms