Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4P46934 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NEDD4P46934 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 POM121L8P-201ENST00000417732 1281 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.88■□□□□ 0.45
NEDD4P46934 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 AC016694.1-201ENST00000434179 700 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
NEDD4P46934 POM121L9P-203ENST00000441984 1285 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.88■□□□□ 0.45
NEDD4P46934 IGHV3-71-201ENST00000523324 359 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.88■□□□□ 0.45
NEDD4P46934 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.88■□□□□ 0.45
NEDD4P46934 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4P46934 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NEDD4P46934 AC078819.1-201ENST00000547454 765 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 AC012085.1-201ENST00000548270 765 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 MIR4259-201ENST00000584466 101 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.88■□□□□ 0.45
NEDD4P46934 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4P46934 MIR6775-201ENST00000617557 69 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 FAM45BP-202ENST00000592932 1624 ntBASIC17.88■□□□□ 0.45
NEDD4P46934 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4P46934 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4P46934 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4P46934 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.87■□□□□ 0.45
NEDD4P46934 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NEDD4P46934 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.87■□□□□ 0.45
NEDD4P46934 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NEDD4P46934 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.87■□□□□ 0.45
NEDD4P46934 AC022210.1-201ENST00000449856 793 ntBASIC17.87■□□□□ 0.45
NEDD4P46934 CTBP2P5-201ENST00000454986 1264 ntBASIC17.87■□□□□ 0.45
NEDD4P46934 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
NEDD4P46934 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NEDD4P46934 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NEDD4P46934 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.87■□□□□ 0.45
NEDD4P46934 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.87■□□□□ 0.45
NEDD4P46934 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 ENPP7P14-201ENST00000621765 1040 ntBASIC17.87■□□□□ 0.45
NEDD4P46934 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NEDD4P46934 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.87■□□□□ 0.45
NEDD4P46934 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NEDD4P46934 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.87■□□□□ 0.45
NEDD4P46934 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NEDD4P46934 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4P46934 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NEDD4P46934 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.86■□□□□ 0.45
NEDD4P46934 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NEDD4P46934 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
NEDD4P46934 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NEDD4P46934 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
NEDD4P46934 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.86■□□□□ 0.45
NEDD4P46934 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 CNN2P8-201ENST00000421872 913 ntBASIC17.86■□□□□ 0.45
NEDD4P46934 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.86■□□□□ 0.45
NEDD4P46934 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.86■□□□□ 0.45
NEDD4P46934 C2orf27AP3-201ENST00000434123 579 ntBASIC17.86■□□□□ 0.45
NEDD4P46934 FO681548.1-201ENST00000455617 1132 ntBASIC17.86■□□□□ 0.45
NEDD4P46934 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NEDD4P46934 RN7SL48P-201ENST00000579283 293 ntBASIC17.86■□□□□ 0.45
NEDD4P46934 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.86■□□□□ 0.45
NEDD4P46934 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4P46934 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.86■□□□□ 0.45
NEDD4P46934 AL354718.3-201ENST00000616414 581 ntBASIC17.86■□□□□ 0.45
NEDD4P46934 CR382287.1-201ENST00000623954 586 ntBASIC17.86■□□□□ 0.45
NEDD4P46934 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NEDD4P46934 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms