Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.57■□□□□ 0.56
PDE6BP35913 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6BP35913 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.57■□□□□ 0.56
PDE6BP35913 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.57■□□□□ 0.56
PDE6BP35913 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
PDE6BP35913 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PDE6BP35913 AC079328.2-201ENST00000561241 3354 ntBASIC18.57■□□□□ 0.56
PDE6BP35913 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDE6BP35913 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6BP35913 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 AC092127.1-201ENST00000567093 3455 ntBASIC18.57■□□□□ 0.56
PDE6BP35913 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6BP35913 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.57■□□□□ 0.56
PDE6BP35913 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
PDE6BP35913 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.56■□□□□ 0.56
PDE6BP35913 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.56■□□□□ 0.56
PDE6BP35913 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.56■□□□□ 0.56
PDE6BP35913 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 MIR6720-201ENST00000611664 98 ntBASIC18.56■□□□□ 0.56
PDE6BP35913 MIR6842-201ENST00000612539 65 ntBASIC18.56■□□□□ 0.56
PDE6BP35913 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PDE6BP35913 AC242376.2-201ENST00000619355 883 ntBASIC18.56■□□□□ 0.56
PDE6BP35913 AC007718.1-201ENST00000621078 280 ntBASIC18.56■□□□□ 0.56
PDE6BP35913 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 AC136759.1-202ENST00000530858 2194 ntBASIC18.56■□□□□ 0.56
PDE6BP35913 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.56■□□□□ 0.56
PDE6BP35913 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDE6BP35913 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDE6BP35913 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.55■□□□□ 0.56
PDE6BP35913 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE6BP35913 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PDE6BP35913 AP000356.3-201ENST00000382243 753 ntBASIC18.55■□□□□ 0.56
PDE6BP35913 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PDE6BP35913 AL592076.1-201ENST00000424448 303 ntBASIC18.55■□□□□ 0.56
PDE6BP35913 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 AC026320.2-201ENST00000434379 478 ntBASIC18.55■□□□□ 0.56
PDE6BP35913 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE6BP35913 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.55■□□□□ 0.56
PDE6BP35913 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDE6BP35913 AC138894.2-201ENST00000602838 371 ntBASIC18.55■□□□□ 0.56
PDE6BP35913 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.55■□□□□ 0.56
PDE6BP35913 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDE6BP35913 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.55■□□□□ 0.56
PDE6BP35913 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDE6BP35913 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDE6BP35913 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PDE6BP35913 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms