Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.12■□□□□ 0.17
CHKAP35790 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CHKAP35790 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.12■□□□□ 0.17
CHKAP35790 C1QBPP1-201ENST00000400117 770 ntBASIC16.12■□□□□ 0.17
CHKAP35790 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 ACTG1P3-201ENST00000431775 1114 ntBASIC16.12■□□□□ 0.17
CHKAP35790 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.12■□□□□ 0.17
CHKAP35790 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.12■□□□□ 0.17
CHKAP35790 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.12■□□□□ 0.17
CHKAP35790 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.12■□□□□ 0.17
CHKAP35790 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.12■□□□□ 0.17
CHKAP35790 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 AC120045.2-201ENST00000567334 178 ntBASIC16.12■□□□□ 0.17
CHKAP35790 AL359881.2-201ENST00000602973 570 ntBASIC16.12■□□□□ 0.17
CHKAP35790 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
CHKAP35790 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.12■□□□□ 0.17
CHKAP35790 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.12■□□□□ 0.17
CHKAP35790 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHKAP35790 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CHKAP35790 AC139749.1-202ENST00000617529 3139 ntBASIC16.12■□□□□ 0.17
CHKAP35790 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHKAP35790 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKAP35790 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 VDAC1P7-201ENST00000462417 847 ntBASIC16.11■□□□□ 0.17
CHKAP35790 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 KRT17P8-201ENST00000540749 863 ntBASIC16.11■□□□□ 0.17
CHKAP35790 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 AC124283.3-201ENST00000570869 594 ntBASIC16.11■□□□□ 0.17
CHKAP35790 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.11■□□□□ 0.17
CHKAP35790 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.11■□□□□ 0.17
CHKAP35790 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKAP35790 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CHKAP35790 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 MROH4P-201ENST00000431302 1578 ntBASIC16.1■□□□□ 0.17
CHKAP35790 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms