Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 AC026320.2-201ENST00000434379 478 ntBASIC18.91■□□□□ 0.62
RFC4P35249 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.91■□□□□ 0.62
RFC4P35249 AC079112.1-201ENST00000454972 939 ntBASIC18.91■□□□□ 0.62
RFC4P35249 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.91■□□□□ 0.62
RFC4P35249 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.91■□□□□ 0.62
RFC4P35249 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.91■□□□□ 0.62
RFC4P35249 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.91■□□□□ 0.62
RFC4P35249 MIR6720-201ENST00000611664 98 ntBASIC18.91■□□□□ 0.62
RFC4P35249 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RFC4P35249 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.91■□□□□ 0.62
RFC4P35249 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RFC4P35249 CICP11-201ENST00000434745 2827 ntBASIC18.91■□□□□ 0.62
RFC4P35249 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.91■□□□□ 0.62
RFC4P35249 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC4P35249 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.91■□□□□ 0.62
RFC4P35249 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.9■□□□□ 0.62
RFC4P35249 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 AC009090.5-201ENST00000624886 2285 ntBASIC18.9■□□□□ 0.62
RFC4P35249 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.9■□□□□ 0.62
RFC4P35249 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RFC4P35249 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.9■□□□□ 0.62
RFC4P35249 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 AL592076.1-201ENST00000424448 303 ntBASIC18.9■□□□□ 0.62
RFC4P35249 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC4P35249 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.9■□□□□ 0.62
RFC4P35249 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC4P35249 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC4P35249 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.9■□□□□ 0.62
RFC4P35249 DNM1P30-201ENST00000563586 452 ntBASIC18.9■□□□□ 0.62
RFC4P35249 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.9■□□□□ 0.62
RFC4P35249 AC138894.2-201ENST00000602838 371 ntBASIC18.9■□□□□ 0.62
RFC4P35249 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.9■□□□□ 0.62
RFC4P35249 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RFC4P35249 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RFC4P35249 AL138725.1-201ENST00000407347 1314 ntBASIC18.9■□□□□ 0.62
RFC4P35249 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC4P35249 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.9■□□□□ 0.62
RFC4P35249 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC4P35249 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.9■□□□□ 0.62
RFC4P35249 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RFC4P35249 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RFC4P35249 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC4P35249 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.89■□□□□ 0.62
RFC4P35249 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RFC4P35249 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 AL627389.1-201ENST00000413508 1182 ntBASIC18.89■□□□□ 0.61
RFC4P35249 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.89■□□□□ 0.61
RFC4P35249 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC4P35249 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC4P35249 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.89■□□□□ 0.61
RFC4P35249 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.89■□□□□ 0.61
RFC4P35249 MIR6769A-201ENST00000617340 73 ntBASIC18.89■□□□□ 0.61
RFC4P35249 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 NKILA-202ENST00000614771 2598 ntBASIC18.89■□□□□ 0.61
RFC4P35249 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC4P35249 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFC4P35249 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms