Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C8orf49-201ENST00000525043 1968 ntBASIC11.29□□□□□ -0.6
CKS2P33552 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS2P33552 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CKS2P33552 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS2P33552 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.29□□□□□ -0.6
CKS2P33552 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS2P33552 AC092474.2-201ENST00000424288 719 ntBASIC11.29□□□□□ -0.6
CKS2P33552 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 OR7E14P-202ENST00000530490 1290 ntBASIC11.29□□□□□ -0.6
CKS2P33552 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS2P33552 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 AC092119.3-201ENST00000612618 583 ntBASIC11.29□□□□□ -0.6
CKS2P33552 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 AC018442.1-201ENST00000421439 2061 ntBASIC11.29□□□□□ -0.6
CKS2P33552 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.29□□□□□ -0.6
CKS2P33552 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 AC084364.1-201ENST00000551967 1556 ntBASIC11.28□□□□□ -0.6
CKS2P33552 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 KRT8P37-201ENST00000451609 1420 ntBASIC11.28□□□□□ -0.6
CKS2P33552 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CKS2P33552 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CKS2P33552 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 AC108073.2-201ENST00000464002 357 ntBASIC11.28□□□□□ -0.6
CKS2P33552 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.28□□□□□ -0.6
CKS2P33552 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.28□□□□□ -0.6
CKS2P33552 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.28□□□□□ -0.6
CKS2P33552 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 RN7SL850P-201ENST00000579959 291 ntBASIC11.28□□□□□ -0.6
CKS2P33552 AP000845.1-201ENST00000581677 2131 ntBASIC11.28□□□□□ -0.6
CKS2P33552 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 NPAP1P7-201ENST00000613027 823 ntBASIC11.28□□□□□ -0.6
CKS2P33552 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms