Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TP53TG3HP-202ENST00000569755 579 ntBASIC15.11■□□□□ 0.01
VARSP26640 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.11■□□□□ 0.01
VARSP26640 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.11■□□□□ 0.01
VARSP26640 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
VARSP26640 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.11■□□□□ 0.01
VARSP26640 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VARSP26640 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VARSP26640 AC087499.6-201ENST00000411576 835 ntBASIC15.1■□□□□ 0.01
VARSP26640 MRPS18AP1-201ENST00000414458 589 ntBASIC15.1■□□□□ 0.01
VARSP26640 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 AC007274.1-201ENST00000439805 662 ntBASIC15.1■□□□□ 0.01
VARSP26640 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.1■□□□□ 0.01
VARSP26640 AC011495.1-201ENST00000498085 584 ntBASIC15.1■□□□□ 0.01
VARSP26640 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.1■□□□□ 0.01
VARSP26640 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 ADAM3B-201ENST00000569937 840 ntBASIC15.1■□□□□ 0.01
VARSP26640 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 AC004461.2-201ENST00000629517 803 ntBASIC15.1■□□□□ 0.01
VARSP26640 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.1■□□□□ 0.01
VARSP26640 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARSP26640 AL391825.1-201ENST00000457671 1364 ntBASIC15.1■□□□□ 0.01
VARSP26640 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.1■□□□□ 0.01
VARSP26640 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VARSP26640 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 AC023024.2-201ENST00000623561 1993 ntBASIC15.09■□□□□ 0.01
VARSP26640 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.09■□□□□ 0.01
VARSP26640 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VARSP26640 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VARSP26640 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.09■□□□□ 0.01
VARSP26640 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.09■□□□□ 0.01
VARSP26640 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.09■□□□□ 0.01
VARSP26640 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms