Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CHMLP26374 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHMLP26374 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 AC113367.3-201ENST00000508316 1912 ntBASIC18.34■□□□□ 0.53
CHMLP26374 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 KLF2P2-201ENST00000416807 1039 ntBASIC18.34■□□□□ 0.53
CHMLP26374 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 MIR4745-201ENST00000577608 62 ntBASIC18.34■□□□□ 0.53
CHMLP26374 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMLP26374 CLUHP6-201ENST00000580789 941 ntBASIC18.34■□□□□ 0.53
CHMLP26374 WFDC1-204ENST00000613603 549 ntBASIC18.34■□□□□ 0.53
CHMLP26374 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHMLP26374 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMLP26374 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 SNX18-202ENST00000343017 3140 ntBASIC18.34■□□□□ 0.53
CHMLP26374 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMLP26374 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.33■□□□□ 0.53
CHMLP26374 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMLP26374 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMLP26374 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMLP26374 AC097359.2-201ENST00000604992 2389 ntBASIC18.33■□□□□ 0.53
CHMLP26374 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMLP26374 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMLP26374 AC018665.1-201ENST00000622927 1362 ntBASIC18.33■□□□□ 0.53
CHMLP26374 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CHMLP26374 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHMLP26374 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHMLP26374 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMLP26374 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHMLP26374 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CHMLP26374 EIF3FP3-201ENST00000434851 1086 ntBASIC18.33■□□□□ 0.52
CHMLP26374 AC190387.1-201ENST00000551683 408 ntBASIC18.33■□□□□ 0.52
CHMLP26374 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHMLP26374 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMLP26374 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMLP26374 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMLP26374 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CHMLP26374 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMLP26374 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMLP26374 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMLP26374 AP001267.2-201ENST00000532619 2086 ntBASIC18.33■□□□□ 0.52
CHMLP26374 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMLP26374 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMLP26374 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMLP26374 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CHMLP26374 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHMLP26374 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMLP26374 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms