Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 MIR6787-201ENST00000616675 61 ntBASIC16.64■□□□□ 0.25
RFX1P22670 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 FGD5P1-202ENST00000614866 2498 ntBASIC16.64■□□□□ 0.25
RFX1P22670 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX1P22670 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 REXO1L4P-201ENST00000605109 1937 ntBASIC16.64■□□□□ 0.25
RFX1P22670 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 ACE3P-201ENST00000423435 1973 ntBASIC16.64■□□□□ 0.25
RFX1P22670 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX1P22670 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RFX1P22670 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 AP000845.1-201ENST00000581677 2131 ntBASIC16.63■□□□□ 0.25
RFX1P22670 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.63■□□□□ 0.25
RFX1P22670 AC119751.2-201ENST00000504529 210 ntBASIC16.63■□□□□ 0.25
RFX1P22670 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX1P22670 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX1P22670 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX1P22670 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RFX1P22670 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFX1P22670 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX1P22670 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFX1P22670 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX1P22670 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX1P22670 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFX1P22670 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFX1P22670 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.62■□□□□ 0.25
RFX1P22670 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.62■□□□□ 0.25
RFX1P22670 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX1P22670 KLF2P4-201ENST00000451959 1225 ntBASIC16.62■□□□□ 0.25
RFX1P22670 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RFX1P22670 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.62■□□□□ 0.25
RFX1P22670 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX1P22670 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX1P22670 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.62■□□□□ 0.25
RFX1P22670 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.62■□□□□ 0.25
RFX1P22670 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RFX1P22670 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
RFX1P22670 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RFX1P22670 AC010319.3-201ENST00000597028 470 ntBASIC16.62■□□□□ 0.25
RFX1P22670 TMEM261P1-201ENST00000604899 340 ntBASIC16.62■□□□□ 0.25
RFX1P22670 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFX1P22670 MIR8072-201ENST00000614241 80 ntBASIC16.62■□□□□ 0.25
RFX1P22670 AL158212.4-201ENST00000624062 1286 ntBASIC16.62■□□□□ 0.25
RFX1P22670 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFX1P22670 CICP23-201ENST00000605013 2741 ntBASIC16.62■□□□□ 0.25
RFX1P22670 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX1P22670 AJ011931.1-201ENST00000618749 2492 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms