Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
COL9A1P20849 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 AC090502.4-201ENST00000551714 1386 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 CAP2P1-201ENST00000557743 1390 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 OR2K2-202ENST00000374428 1038 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 RPL8P2-201ENST00000430538 502 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC15.54■□□□□ 0.08
COL9A1P20849 RSL24D1P2-201ENST00000445584 366 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 AC004837.1-201ENST00000446267 564 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.54■□□□□ 0.08
COL9A1P20849 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 AC023906.1-201ENST00000486386 453 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 POU5F1P2-201ENST00000521750 823 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
COL9A1P20849 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 MIR4522-201ENST00000584932 87 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 AC107464.3-201ENST00000609172 737 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 HMGB1P24-201ENST00000611897 328 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 OR6D1P-203ENST00000641209 4860 ntBASIC15.54■□□□□ 0.08
COL9A1P20849 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.54■□□□□ 0.08
COL9A1P20849 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL9A1P20849 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.54■□□□□ 0.08
COL9A1P20849 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COL9A1P20849 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
COL9A1P20849 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 MTND2P9-201ENST00000422293 931 ntBASIC15.53■□□□□ 0.08
COL9A1P20849 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.53■□□□□ 0.08
COL9A1P20849 FAM8A4P-201ENST00000435433 1213 ntBASIC15.53■□□□□ 0.08
COL9A1P20849 AL049829.1-201ENST00000465411 156 ntBASIC15.53■□□□□ 0.08
COL9A1P20849 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.53■□□□□ 0.08
COL9A1P20849 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.53■□□□□ 0.08
COL9A1P20849 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.53■□□□□ 0.08
COL9A1P20849 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.53■□□□□ 0.08
COL9A1P20849 AC087392.5-201ENST00000612517 489 ntBASIC15.53■□□□□ 0.08
COL9A1P20849 AL450487.2-201ENST00000615934 407 ntBASIC15.53■□□□□ 0.08
COL9A1P20849 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COL9A1P20849 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 AP003680.1-201ENST00000598970 3660 ntBASIC15.53■□□□□ 0.08
COL9A1P20849 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
COL9A1P20849 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL9A1P20849 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.52■□□□□ 0.08
COL9A1P20849 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL9A1P20849 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.52■□□□□ 0.08
COL9A1P20849 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.52■□□□□ 0.08
COL9A1P20849 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL9A1P20849 AC112504.1-201ENST00000623415 1841 ntBASIC15.52■□□□□ 0.08
COL9A1P20849 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
COL9A1P20849 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL9A1P20849 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms