Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.35■□□□□ 0.05
CTPS1P17812 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CTPS1P17812 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 ACKR1-201ENST00000368121 1240 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 NUS1P3-201ENST00000423502 862 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 HLA-K-203ENST00000430151 1046 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 AC012441.1-201ENST00000446669 685 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.34■□□□□ 0.05
CTPS1P17812 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 AC022137.2-201ENST00000503482 481 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 AC106760.1-201ENST00000508690 800 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 KRT18P25-201ENST00000508931 1278 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 AP001889.1-201ENST00000525414 633 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.34■□□□□ 0.05
CTPS1P17812 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CTPS1P17812 AC015936.2-201ENST00000593177 259 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.34■□□□□ 0.05
CTPS1P17812 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 AL360270.3-201ENST00000609118 1348 ntBASIC15.34■□□□□ 0.05
CTPS1P17812 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.34■□□□□ 0.05
CTPS1P17812 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTPS1P17812 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CTPS1P17812 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.34■□□□□ 0.05
CTPS1P17812 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CTPS1P17812 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CTPS1P17812 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTPS1P17812 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTPS1P17812 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CTPS1P17812 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 AL139094.1-201ENST00000405549 1188 ntBASIC15.33■□□□□ 0.04
CTPS1P17812 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.33■□□□□ 0.04
CTPS1P17812 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.33■□□□□ 0.04
CTPS1P17812 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.33■□□□□ 0.04
CTPS1P17812 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CTPS1P17812 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.33■□□□□ 0.04
CTPS1P17812 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 AC239800.4-201ENST00000603712 296 ntBASIC15.33■□□□□ 0.04
CTPS1P17812 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
CTPS1P17812 PRSS30P-206ENST00000641773 873 ntBASIC15.33■□□□□ 0.04
CTPS1P17812 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CTPS1P17812 KRT8P35-201ENST00000483942 1338 ntBASIC15.33■□□□□ 0.04
CTPS1P17812 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTPS1P17812 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 AC018665.1-201ENST00000622927 1362 ntBASIC15.33■□□□□ 0.04
CTPS1P17812 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms