Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.71□□□□□ -0.22
HLA-DOBP13765 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HLA-DOBP13765 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 DFFBP1-201ENST00000433250 979 ntBASIC13.7□□□□□ -0.22
HLA-DOBP13765 FAM207CP-201ENST00000443486 507 ntBASIC13.7□□□□□ -0.22
HLA-DOBP13765 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 AC123567.1-201ENST00000548294 1261 ntBASIC13.7□□□□□ -0.22
HLA-DOBP13765 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 MIR4745-201ENST00000577608 62 ntBASIC13.7□□□□□ -0.22
HLA-DOBP13765 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 AC099568.2-201ENST00000609194 695 ntBASIC13.7□□□□□ -0.22
HLA-DOBP13765 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 REXO1L5P-201ENST00000622260 2098 ntBASIC13.7□□□□□ -0.22
HLA-DOBP13765 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DOBP13765 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DOBP13765 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC104596.2-201ENST00000512793 793 ntBASIC13.69□□□□□ -0.22
HLA-DOBP13765 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 API5-211ENST00000534695 560 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 AC093726.1-201ENST00000608064 963 ntBASIC13.69□□□□□ -0.22
HLA-DOBP13765 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms