Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.84□□□□□ -0.19
FREM3P0C091 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.84□□□□□ -0.19
FREM3P0C091 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.84□□□□□ -0.19
FREM3P0C091 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.83□□□□□ -0.19
FREM3P0C091 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
FREM3P0C091 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.83□□□□□ -0.2
FREM3P0C091 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.83□□□□□ -0.2
FREM3P0C091 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
FREM3P0C091 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.83□□□□□ -0.2
FREM3P0C091 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
FREM3P0C091 HLA-K-203ENST00000430151 1046 ntBASIC13.83□□□□□ -0.2
FREM3P0C091 FO681548.1-201ENST00000455617 1132 ntBASIC13.83□□□□□ -0.2
FREM3P0C091 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.83□□□□□ -0.2
FREM3P0C091 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 DUX4L47-201ENST00000566374 394 ntBASIC13.83□□□□□ -0.2
FREM3P0C091 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.83□□□□□ -0.2
FREM3P0C091 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
FREM3P0C091 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.83□□□□□ -0.2
FREM3P0C091 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
FREM3P0C091 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
FREM3P0C091 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FREM3P0C091 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.82□□□□□ -0.2
FREM3P0C091 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 AC078819.1-201ENST00000547454 765 ntBASIC13.82□□□□□ -0.2
FREM3P0C091 AC012085.1-201ENST00000548270 765 ntBASIC13.82□□□□□ -0.2
FREM3P0C091 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.82□□□□□ -0.2
FREM3P0C091 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 AC025181.2-201ENST00000606994 802 ntBASIC13.82□□□□□ -0.2
FREM3P0C091 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
FREM3P0C091 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 KLF2P2-201ENST00000416807 1039 ntBASIC13.82□□□□□ -0.2
FREM3P0C091 AC026954.1-201ENST00000429771 1293 ntBASIC13.82□□□□□ -0.2
FREM3P0C091 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms