Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.34■□□□□ 0.53
APPP05067 AP005019.2-201ENST00000615104 511 ntBASIC18.34■□□□□ 0.53
APPP05067 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
APPP05067 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.34■□□□□ 0.53
APPP05067 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
APPP05067 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
APPP05067 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
APPP05067 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
APPP05067 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
APPP05067 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.33■□□□□ 0.53
APPP05067 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APPP05067 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
APPP05067 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APPP05067 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.33■□□□□ 0.53
APPP05067 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
APPP05067 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APPP05067 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.33■□□□□ 0.53
APPP05067 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.33■□□□□ 0.53
APPP05067 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.33■□□□□ 0.53
APPP05067 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APPP05067 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APPP05067 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
APPP05067 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
APPP05067 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.33■□□□□ 0.52
APPP05067 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.33■□□□□ 0.52
APPP05067 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.33■□□□□ 0.52
APPP05067 NUS1P3-201ENST00000423502 862 ntBASIC18.33■□□□□ 0.52
APPP05067 U91328.1-201ENST00000437528 223 ntBASIC18.33■□□□□ 0.52
APPP05067 USP32P1-208ENST00000506594 1164 ntBASIC18.33■□□□□ 0.52
APPP05067 KRT18P25-201ENST00000508931 1278 ntBASIC18.33■□□□□ 0.52
APPP05067 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.33■□□□□ 0.52
APPP05067 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
APPP05067 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.33■□□□□ 0.52
APPP05067 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.33■□□□□ 0.52
APPP05067 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.33■□□□□ 0.52
APPP05067 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APPP05067 AC233724.13-201ENST00000598383 410 ntBASIC18.33■□□□□ 0.52
APPP05067 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.33■□□□□ 0.52
APPP05067 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.33■□□□□ 0.52
APPP05067 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.33■□□□□ 0.52
APPP05067 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
APPP05067 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.33■□□□□ 0.52
APPP05067 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
APPP05067 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APPP05067 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
APPP05067 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 AC018665.1-201ENST00000622927 1362 ntBASIC18.32■□□□□ 0.52
APPP05067 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.32■□□□□ 0.52
APPP05067 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.32■□□□□ 0.52
APPP05067 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.32■□□□□ 0.52
APPP05067 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 RNU1-114P-201ENST00000365297 166 ntBASIC18.32■□□□□ 0.52
APPP05067 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
APPP05067 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.32■□□□□ 0.52
APPP05067 AC012441.1-201ENST00000446669 685 ntBASIC18.32■□□□□ 0.52
APPP05067 AL355864.2-201ENST00000447420 863 ntBASIC18.32■□□□□ 0.52
APPP05067 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.32■□□□□ 0.52
APPP05067 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.32■□□□□ 0.52
APPP05067 AP001889.1-201ENST00000525414 633 ntBASIC18.32■□□□□ 0.52
APPP05067 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.32■□□□□ 0.52
APPP05067 KRT17P8-201ENST00000540749 863 ntBASIC18.32■□□□□ 0.52
APPP05067 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.32■□□□□ 0.52
APPP05067 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.32■□□□□ 0.52
APPP05067 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.32■□□□□ 0.52
APPP05067 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 AC126365.1-201ENST00000578585 1514 ntBASIC18.32■□□□□ 0.52
APPP05067 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APPP05067 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms