Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.62■□□□□ 0.25
VTNP04004 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 CHMP1AP1-201ENST00000445563 662 ntBASIC16.62■□□□□ 0.25
VTNP04004 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.62■□□□□ 0.25
VTNP04004 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.62■□□□□ 0.25
VTNP04004 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.62■□□□□ 0.25
VTNP04004 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.62■□□□□ 0.25
VTNP04004 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.62■□□□□ 0.25
VTNP04004 MIR4683-201ENST00000579659 81 ntBASIC16.62■□□□□ 0.25
VTNP04004 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 AC244157.2-201ENST00000616239 1006 ntBASIC16.62■□□□□ 0.25
VTNP04004 AP001002.3-201ENST00000623482 206 ntBASIC16.62■□□□□ 0.25
VTNP04004 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
VTNP04004 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.62■□□□□ 0.25
VTNP04004 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VTNP04004 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VTNP04004 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
VTNP04004 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.62■□□□□ 0.25
VTNP04004 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VTNP04004 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.61■□□□□ 0.25
VTNP04004 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.61■□□□□ 0.25
VTNP04004 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.61■□□□□ 0.25
VTNP04004 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.61■□□□□ 0.25
VTNP04004 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.61■□□□□ 0.25
VTNP04004 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTNP04004 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.61■□□□□ 0.25
VTNP04004 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.6■□□□□ 0.25
VTNP04004 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 REXO1L2P-201ENST00000425429 2069 ntBASIC16.6■□□□□ 0.25
VTNP04004 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VTNP04004 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 TMBIM7P-203ENST00000641617 1718 ntBASIC16.6■□□□□ 0.25
VTNP04004 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.6■□□□□ 0.25
VTNP04004 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
VTNP04004 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
VTNP04004 AC100850.1-201ENST00000506768 649 ntBASIC16.6■□□□□ 0.25
VTNP04004 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.6■□□□□ 0.25
VTNP04004 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.6■□□□□ 0.25
VTNP04004 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.6■□□□□ 0.25
VTNP04004 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VTNP04004 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.6■□□□□ 0.25
VTNP04004 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms