Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
KDM4BO94953 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.51□□□□□ -0.25
KDM4BO94953 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.51□□□□□ -0.25
KDM4BO94953 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 PHKG1P2-201ENST00000457537 863 ntBASIC13.51□□□□□ -0.25
KDM4BO94953 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.51□□□□□ -0.25
KDM4BO94953 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.51□□□□□ -0.25
KDM4BO94953 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 AC055717.3-201ENST00000622967 595 ntBASIC13.51□□□□□ -0.25
KDM4BO94953 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KDM4BO94953 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.51□□□□□ -0.25
KDM4BO94953 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KDM4BO94953 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDM4BO94953 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.51□□□□□ -0.25
KDM4BO94953 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
KDM4BO94953 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.5□□□□□ -0.25
KDM4BO94953 ALG1L5P-201ENST00000482043 771 ntBASIC13.5□□□□□ -0.25
KDM4BO94953 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.5□□□□□ -0.25
KDM4BO94953 RARRES2P9-201ENST00000565168 469 ntBASIC13.5□□□□□ -0.25
KDM4BO94953 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.5□□□□□ -0.25
KDM4BO94953 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.5□□□□□ -0.25
KDM4BO94953 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.5□□□□□ -0.25
KDM4BO94953 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.5□□□□□ -0.25
KDM4BO94953 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 COL6A4P2-202ENST00000504443 2753 ntBASIC13.5□□□□□ -0.25
KDM4BO94953 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.5□□□□□ -0.25
KDM4BO94953 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.5□□□□□ -0.25
KDM4BO94953 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDM4BO94953 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms