Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 PIN1P1-201ENST00000412108 996 ntBASIC15.53■□□□□ 0.08
PMPCBO75439 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.53■□□□□ 0.08
PMPCBO75439 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.53■□□□□ 0.08
PMPCBO75439 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 AC190387.1-201ENST00000551683 408 ntBASIC15.53■□□□□ 0.08
PMPCBO75439 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 AL359711.2-201ENST00000563105 872 ntBASIC15.53■□□□□ 0.08
PMPCBO75439 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.53■□□□□ 0.08
PMPCBO75439 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PMPCBO75439 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.53■□□□□ 0.08
PMPCBO75439 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 AL157414.3-201ENST00000624276 1954 ntBASIC15.53■□□□□ 0.08
PMPCBO75439 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.52■□□□□ 0.08
PMPCBO75439 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.52■□□□□ 0.08
PMPCBO75439 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PMPCBO75439 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PMPCBO75439 C1QBPP1-201ENST00000400117 770 ntBASIC15.52■□□□□ 0.08
PMPCBO75439 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.52■□□□□ 0.08
PMPCBO75439 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.52■□□□□ 0.08
PMPCBO75439 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PMPCBO75439 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.52■□□□□ 0.08
PMPCBO75439 AC093813.1-201ENST00000605066 256 ntBASIC15.52■□□□□ 0.08
PMPCBO75439 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.52■□□□□ 0.08
PMPCBO75439 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.52■□□□□ 0.08
PMPCBO75439 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PMPCBO75439 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PMPCBO75439 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PMPCBO75439 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PMPCBO75439 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PMPCBO75439 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PMPCBO75439 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.52■□□□□ 0.07
PMPCBO75439 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.52■□□□□ 0.07
PMPCBO75439 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.52■□□□□ 0.07
PMPCBO75439 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PMPCBO75439 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.51■□□□□ 0.07
PMPCBO75439 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PMPCBO75439 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms