Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
TRIM3O75382 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 AL359183.1-201ENST00000623796 2132 ntBASIC14.3□□□□□ -0.12
TRIM3O75382 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM3O75382 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRIM3O75382 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM3O75382 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRIM3O75382 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRIM3O75382 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM3O75382 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 KRT18P43-201ENST00000469825 1281 ntBASIC14.3□□□□□ -0.12
TRIM3O75382 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM3O75382 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 AC092552.1-201ENST00000547243 906 ntBASIC14.3□□□□□ -0.12
TRIM3O75382 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRIM3O75382 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRIM3O75382 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 CU639417.3-201ENST00000624240 1404 ntBASIC14.3□□□□□ -0.12
TRIM3O75382 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM3O75382 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM3O75382 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRIM3O75382 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM3O75382 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM3O75382 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM3O75382 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 AP006294.1-201ENST00000415407 339 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM3O75382 AC005034.1-201ENST00000426657 489 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM3O75382 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM3O75382 FAM86LP-201ENST00000478302 853 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM3O75382 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM3O75382 AC000095.1-201ENST00000603208 874 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM3O75382 AL035252.4-201ENST00000624174 288 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 AC063926.2-201ENST00000623766 1308 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM3O75382 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM3O75382 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms