Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNND1O60716 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 AC105250.1-201ENST00000509378 2057 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNND1O60716 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNND1O60716 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTNND1O60716 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CTNND1O60716 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.71■□□□□ 0.42
CTNND1O60716 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.71■□□□□ 0.42
CTNND1O60716 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
CTNND1O60716 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTNND1O60716 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNND1O60716 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNND1O60716 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNND1O60716 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 Z97180.1-201ENST00000445173 988 ntBASIC17.7■□□□□ 0.42
CTNND1O60716 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.7■□□□□ 0.42
CTNND1O60716 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.7■□□□□ 0.42
CTNND1O60716 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.7■□□□□ 0.42
CTNND1O60716 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 AL136301.1-201ENST00000615830 422 ntBASIC17.7■□□□□ 0.42
CTNND1O60716 AL162426.1-201ENST00000624141 743 ntBASIC17.7■□□□□ 0.42
CTNND1O60716 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CTNND1O60716 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTNND1O60716 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.7■□□□□ 0.42
CTNND1O60716 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.7■□□□□ 0.42
CTNND1O60716 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.69■□□□□ 0.42
CTNND1O60716 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.69■□□□□ 0.42
CTNND1O60716 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CTNND1O60716 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CTNND1O60716 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.69■□□□□ 0.42
CTNND1O60716 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CTNND1O60716 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.69■□□□□ 0.42
CTNND1O60716 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.69■□□□□ 0.42
CTNND1O60716 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.69■□□□□ 0.42
CTNND1O60716 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 AC026740.1-201ENST00000607068 791 ntBASIC17.69■□□□□ 0.42
CTNND1O60716 AC002472.3-201ENST00000640124 621 ntBASIC17.69■□□□□ 0.42
CTNND1O60716 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.69■□□□□ 0.42
CTNND1O60716 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 AC004899.1-201ENST00000424687 1714 ntBASIC17.69■□□□□ 0.42
CTNND1O60716 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNND1O60716 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CTNND1O60716 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CTNND1O60716 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CTNND1O60716 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms