Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.23■□□□□ 0.03
LDB2O43679 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.23■□□□□ 0.03
LDB2O43679 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.23■□□□□ 0.03
LDB2O43679 KLF2P2-201ENST00000416807 1039 ntBASIC15.23■□□□□ 0.03
LDB2O43679 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.23■□□□□ 0.03
LDB2O43679 AC114812.1-204ENST00000449669 728 ntBASIC15.23■□□□□ 0.03
LDB2O43679 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.23■□□□□ 0.03
LDB2O43679 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.23■□□□□ 0.03
LDB2O43679 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.23■□□□□ 0.03
LDB2O43679 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 DUX4L47-201ENST00000566374 394 ntBASIC15.23■□□□□ 0.03
LDB2O43679 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.23■□□□□ 0.03
LDB2O43679 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.23■□□□□ 0.03
LDB2O43679 AC012645.4-201ENST00000610691 1061 ntBASIC15.23■□□□□ 0.03
LDB2O43679 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 CU634019.7-201ENST00000624153 1185 ntBASIC15.23■□□□□ 0.03
LDB2O43679 FP236241.2-201ENST00000624906 1185 ntBASIC15.23■□□□□ 0.03
LDB2O43679 AC018529.2-202ENST00000611482 3087 ntBASIC15.23■□□□□ 0.03
LDB2O43679 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.23■□□□□ 0.03
LDB2O43679 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LDB2O43679 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.23■□□□□ 0.03
LDB2O43679 AC018442.1-201ENST00000421439 2061 ntBASIC15.23■□□□□ 0.03
LDB2O43679 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LDB2O43679 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 AC063926.2-201ENST00000623766 1308 ntBASIC15.22■□□□□ 0.03
LDB2O43679 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 AC023090.2-201ENST00000625182 2110 ntBASIC15.22■□□□□ 0.03
LDB2O43679 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.22■□□□□ 0.03
LDB2O43679 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 ACKR1-201ENST00000368121 1240 ntBASIC15.22■□□□□ 0.03
LDB2O43679 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.22■□□□□ 0.03
LDB2O43679 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LDB2O43679 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.22■□□□□ 0.03
LDB2O43679 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 AL162726.2-201ENST00000438986 1017 ntBASIC15.22■□□□□ 0.03
LDB2O43679 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.22■□□□□ 0.03
LDB2O43679 AC005225.4-201ENST00000557330 545 ntBASIC15.22■□□□□ 0.03
LDB2O43679 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 AP005019.2-201ENST00000615104 511 ntBASIC15.22■□□□□ 0.03
LDB2O43679 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.22■□□□□ 0.03
LDB2O43679 AL033527.5-201ENST00000641382 801 ntBASIC15.22■□□□□ 0.03
LDB2O43679 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
LDB2O43679 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
LDB2O43679 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
LDB2O43679 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LDB2O43679 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDB2O43679 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LDB2O43679 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LDB2O43679 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
LDB2O43679 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
LDB2O43679 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms